CDS
Accession Number | TCMCG077C08391 |
gbkey | CDS |
Protein Id | KAF5733647.1 |
Location | complement(join(696354..696755,697540..697800,698250..698462,699403..699543,699638..699757,700674..700749,700827..700930,701265..701339,701445..701609,701767..701931,702031..702272,702747..702826,702932..703059,703846..703961,704897..704990,705418..705535,705649..705722,705868..705920,706002..706182,706530..706575,706661..706738,707129..707199,707480..707543,708591..708667,708932..709057,709157..709211,710243..710282,710839..710954,711052..711167,711444..711556,711665..711809,711882..712001,712094..712270,712860..712932,713034..713190,713323..714202,714333..714526,714626..714805,714979..715045,715327..715525,721458..721504,721616..721712,721817..721959,722103..722207,722361..722486)) |
Organism | Tripterygium wilfordii |
locus_tag | HS088_TW16G00087 |
Protein
Length | 2139aa |
Molecule type | protein |
Topology | linear |
Data_file_division | PLN |
dblink | BioProject:PRJNA542587, BioSample:SAMN11634134 |
db_source | JAAARO010000016.1 |
Definition | DNA-directed RNA polymerase I subunit RPA2 isoform X1 [Tripterygium wilfordii] |
Locus_tag | HS088_TW16G00087 |
EGGNOG-MAPPER Annotation
Sequence
CDS: ATGGATCCTGCTGCTTCCAAGAAAATGGAGGGCGTGAAGTCTGATGTTGCAGATGCACCCGGCAATTCCTCTTCTAATAACAGAGAGATGGAAGCTGCTGAAGCGCGATTCATGGAATTATGCAAGAGTGGATTTTCCTTGGACGATGACACTTGCTCTCAAGCTGTGAAGCTATTCAAAGAAACTGAGAAACTTTTGCTGACTAACATGTCAGCTTTTGGAAATGGAATGCCTGAGGAAGCAGAGCGATTTTGGTTTGCATTTGTTTTATACTCGGTGAAGAGGTTACGTGAAAAGAATGAAGATAATGCTCAGCAAGGAGCTGATGGTAGTGGTTTTAACTTGTGCCAAATATTAAGAGTTTTAAAGCTTAGCCTTGTTGATTTCTTGAAGGAGTTACCTCAGTTTGTCGTCAGGGCAGGCCCTTTATTAAGCAATGTGTATGGTGCTGACTGGGAGAGTAGACTTGAGGCAAAGGAGTTGCAGGTCAACTATGAGCACTTGAACAATTTAAGCAGGCTCTACAAGCGGGCATATCTAGAATTCTTCTTGACAAGTGATGCAAAGGATGATGGGAAGGTGACTTTTGGCAGCTTGACTGGGAATGTGTCTGATTATCATCGTTTTGGGTGGTTACTGTTTTTGGCGCTTCGTACACATACATTCAGCCGCGCCAAAGATCTAGTAACTTGCACAAATGGTTTGGTTTCCGTACTGGCTATTTTGCTCATTCATGTTCCTGTTCGCTTCAGGAAATTCAGCATCCATGAATTTCCAGGATTTGTTAAGAAAGGTGACAAAGATGTTGACTTGCCAGCATCCCTTTGCAACATCTATGAAACATCGGAAGATGACTTGAGGAAAATAATGGGGATGGCCAATAACTTAATAACAGATATACTGAAGAAGACACCCCTTACTGCATCTGAGTGCAAAACTGAAAACTTGGAAAGTATTGATACAGATGGTCTGACATATTTTGATGATCTAATGGAGGAATCATCTTTGTCATCCAGTTTAAATATTTTGGAAAAGGATTATGATGATGCACTCCTTAACAAGGGTGGACTGGATGAGAGAATTTTTATTAGTGAGGACAGTCTGCTTGGTTCAGCAGGGACCTTGTCTAGTGGTACTGTTAATAGTGGTGGTGTTAAGAGAAAGTACGATTCAATAACCTCACCGGCAAAGACAATTACAAGTCCTCTCTCTCCCCATCGCTCTTCAGCATCTCATGCAAATGGGATTCCTAGTGGTGCAAACTCGAAGTTGGCAGCCACACCTGTAAGCACGACAATGACAACTGCTAAGTGGCTCCGGACCATCATTTCTCCACTTCCACCAAAACCATCTGCTGACCTGGAGCGCTTCCTGGCGTCATGTGACAAGGATATGACTAATGACATTATGCGCAGGGCAAATATAATACTGGAAGCTATATTTCCGAGTAGTGCTCTAGGAGAGCGTTGTGTGACTGGAAGATTGCAAATTGCAAACCCGATGGACAATATATGGGCAGAAGAGCGAAGACTGGAAGCAAAGAAGTTGTATTGCAGGGTTTTGGAAACCATGTGCAAAGCAGAGGCCCAAATATTGCATGCAACAAATTTAACCTCTTTATTAACTAACGAGAGGTTTCACAGATGTATGCTTGCCTGTTCTGCAGAACTAGTTTTGGCAACACATAAGACAGTCACAATGTTGTTTCCTGCTGTTTTGGATAGGACTGGCATCACCTCTTTTGATCTTAGCAAGATCATTGAGAGTTTCATTAGACATGAGGAATCTCTCCCTAGAGAATTGAGGCGGCATCTCAATTCATTGGAAGAGCGGCTTTTGGAGAGCATGGTATGGGAAAAGGGCTCGTCAATGTACAACTCCTTGATGGTTGCAAAGCCATCCCTCTCTGCAGAAATAAATCGTCTTGGTTTATTAGCTGAACCAATGCTATCTCTGGATGCTATTGCTCTGCATATTAACTTTTCTTCGGGAAGGTTGCCTACTGTGCCTTCTTTTCAAAAGCACGAAACTTATCCAGGTCAGAATGGGGATGTGAGGTCCCCAAAGAGGCCATGCACTGACTACCGGAGTGTGTTAGTAGAGCGGAATTCCTTCACATCACCTGTGAAGGATCGCTTGCTGGCTTTCAGTAACCTCAAATCAAAGCTACCTCCTTTGCAGTCTGCATTTGCAAGTCCAACACGACCAAGCCCAAGTGGAGGAGGAGAAACTTGTGCTGAGACAGGGATCAATATATTCTTTAGCAAGATTAATAAGTTGGCTGCCGTCAGAATAAATGGTATGGTGGAAAGGCTACAACTCTCTCAGCAGATTAGGGAAAGTGTCTATTGTCTTTTTCAACAGATACTTGTTCGGCAAACATCTCTTTTCTTTAACCGTCATATTGACCAGATCATCCTGTGCTGTTTCTATGGCGTTGCGAAGATTAATCAACTAAACCTGACCTTTAAGGAGATCATCTACAACTATAGGAAGCAACCGCAATGCAAACCACAAGTTTTTCGCAGTGTGTTTGTTGATTGGTCATCTGCTCGTCACAACAGTAGAAAAGGGCAGGATCACGTTGATATTATTACATTTTACAACGAAATATTTATTCCTAGTGTGAAGCCTCTGGTACTGGAGATTGGCCCTGTTGGATCAGCGTCAAAAATTAGCTGTGGTCCTGCAATCAATACTACTAATGATGGTCATTGTCCTGGGTCTCCTAAAGTATCTTATTTTCCAAGTCTCCCTGACATGTCCCCCAAAAAAGTATCTACAACACACAATGTTTATGTCTCTCCATTGCGTACATCTAAGATGGATGCTTTAATCTGTCACAGCGCAAAAAGTTATTATGCATGTGTGGGAGAGAGTACACATGCTTACCAGAGTCCTTCAAAGGACTTGACTGCTATCAATAACCGCTTGAACGGTAACCGGAAGATCAGAGGCATGCTCAACTTTGATGACGCTGATGTTGGCTTAGTTAGTGATTCTATGGTGGCCAACAGCCTTTACCTTCAAAATGGGAGTTGTGCATCTTCGTCAGGTAGCTTCATACCAATTGAAGTTGGCTTCCAACAGCTCAGTCCTGTAAAGGAAGGTACAGTGAAGAACATGAACACGCCTCTGCTTCCTTTCGAATGTCGACAGGCGAAAATTTCATATGCTGGAAAATTCACTGCAGATGTTTGCTTCCAGTATGGTGGTGCTGGTGCTGCTGTTATCCGGGAAAATTTTAATCTTGGGCATTTTCCTGTAATGTTAATGTCTATGCTTTGTCACTTGAAAAGTGCTGATCCAAAGATATTGGTTTCGTGCAAGGAAGAACCGACAGAAATGGGTGGTTACTTCATTTTGAATGGGCTTGAGAGAGTTTTCCGACTTGTGATCTTGCCGAAGCGGAATTATCCAATGAGTATGGTGAGGAGTTCATTTTCTGAACGGCGGGAAGGATACACTGATAAAGCAGTTGTTATAAGGTGTGTAAGAGAGGATATGTCTGCAGTAACAGTTAAATTATACTATCTTCGCAATGGAAGCGCAAGACTTGGATTTTGGATACGGAATAGGGAGTACATGCTTCCTGTTGGCATTGTTCTTAAGGCTCTTGTTGACACTAGCGACCGTGAGATTTATGAGAATTTGACATGCTTCTATGATGAGAAATATGAGAAGGTAAAGGGCGCTGTTGGGACTCCTCTTGTGGGTGAGAGAGCAAAAATTATCCTTGATGAACTTCGAGACTTGTCTCTTTTCACTAGGACACAATGTCGACATCACATTGGGCAGCACTTTCGAGAAGTCATGATTGGGCTGGAGAAGAAAAGTTTTTCTGATGTGGCTGATGCTGTTCTGAAGGACTACATATTTGTTCACCTAAATAACAATGATGACAAGTTCAATCTACTCATCTTTATGGTTCAGAAACTCTTTTCACTTATAGATCAGACATCTGTACCAGACAATTCGGATTCCTTACAAAATCAGGAAGCCTTACTTCCTGGTCATCTGATTACTATTTATCTCAAGGAGAAACTAGAAGAGTGGCTACAAAAAGCAAAAAAGCTCCTTGAGGATGAAATTAGTGACAAAAGCCCAAAAAAAGCTTTTGACCTCTGCAGCTTAGCACATGTCAAAAAGGTCATTGATAAAAATCCTCTGAAGCAAATTGGTCCAGCTATTGAGGCCATGCTACGGTCTGGAGGATTAGCTACACAATCAGGCCTGGATTTACAGCAGAGAGCGGGCTTCACAGTCCAGGCGGAGCGGCTTAATTTTCTGCGATTTATTTCATTTTTTCGATCTGTTCATCGAGGAACTTCTTTTGCTGGACTTCGGACAACAAGTGTTCGGAAATTGCTTCCTGAATCTTGGGGTTTTCTTTGTCCTGTCCACACACCTGATGGAGAGCCATGTGGATTGTTGAATCATATGACCTGCACTTGTCGTATTACATCACACATTGATTCGAAAAGGGGAAATAGGGACTTTTTTAAAATTAGAGCGTCTATTCTTAATGTCCTAGTTGGCATTGGAATGACATCTTCATTACCAAAACTTGTTAAAGCTGGTCCTCCTCAAATTCTCCATGTTCTTCTAGATGGTCGTGTTGTTGGTGTTATACCCTCCAGTGAAGCTGAGAAAGTTGTCTCCCATTTAAGGAAATTGAAAGTGTTAGCAAGTTCAGTGATTCCTGATGATCTGGAAGTGGGATATGTTCCTCTGAGCTTGGGTGGTGCATATCCTGGTCTGTATTTGTTCACAAATCCTTCTAGATTTGTTCGCCCAGTTAAAAATTTGTCTATCCCTTCCAATGAAAGTCAGAATATTGAACTTATTGGACCATTTGAACAGGTTTTCATGGAAATAAGATGTCCGGATGGTGGAGATGGAGGAAGAAAGAATGCCTTCCCTGCAACTCATGAAGAAATTCATCCAACTGGAATGCTCAGTGTTGTCGCTAATCTCACACCTTGGTCGGAGCATAATCAGAGCCCACGTAACATGTACCAGTGTCAGATGGCAAAGCAAACAATGGCTTTCTCGTCAGTAGCTCTTCAATTTCGTGCTGATCAAAAGTTATATCATCTTCAGACGCCTCAAAGTCCCATTGTACGCACGAGTAGTTATACAAAGTACAGCATGGACGAACATCCATCAGGTACAAATGCAATTGTTGCGGTGCTTGCATATACAGGATACGATATGGAGGATGCAATGATTCTGAATAAGTCATCTGTTGATCGTGGGATGTGTCACGGTGAAATATATCAGACGGAGACTATTGATTTATGTGATGGGAAAAGCAAGTCAGATAGGATTTTCAGAAGAAGTAACATTGATAAGTCAGTTCTTCCCTTGATTGACGCTGATGGACTTCCGTATGTTGGTCAGATAATACATCCAAACGAGCCCTATTGTAGCATTTATAATGAAACAACAAGTACAACAAAAACCAACAATCGAAAAGGTTCTGAATCTGTTATAGTTGACTATGTTGCGGTCGATACAAAGAACAAGAAGGATATTCAAAAGGTTAATATACGATTTCGACACCCTAGGAATCCTGTTATTGGCGATAAGTTTAGCAGTAGGCATGGGCAGAAGGGTGTGTGCTCCCAGTTGTGGCCAGATATTGATATGCCATTTTCTGGAGTCACAGGAATGCGTCCAGATCTTATTATTAATCCGCATGCTTTTCCTTCAAGGATGACTATTGCAATGCTTTTGGAATCTATTGCTGCAAAGGGAGGCAGCTTACATGGACGGTTCATGGATGCAACACCATTTGCCAGTTCAGTGAAGGAGAGAGCTAATGAGAGGGATACGACATCAGAGTCTAAATCTCTAGTCGATGAGCTCGGTGAATTGTTGAGGGAAAAAGGCTTTAATTATCACGGTTCTGAGGTATTATATAGTGGGGTCTATGGAATTGAACTTACATGCGAAATTTTTATTGGGCCTGTTTATTACCAACGGCTACGGCACATGGTTTCAGACAAATATCAGGTTCGGTCCACCGGAAGGGTTGACCATGCCACTCGACAGCCTATTAAAGGAAGGAAGCATGGTGGAGGTATCCGCTTTGGGGAAATGGAACGAGATGCCATGCTTGCTCACGGGGCAGCGTATTTGTTACATGACAGGCTGCATACATGTTCTGATTATCATGTTGCTGATCTGTGTTCACTATGTGGAAGCATCCTCACAACAGTGTACAACCAGTCACAAAAGCGACCTGTCCGACAGATAGGAGGGCTACCTCCTGGAAGGGCTCCCAAGAAGGTCACTTGCAACGCATGTCAAACAAATAAAGGAATGGAGACTGTTGCCATGCCTTATGTTTTTCGATATTTGGCTGCCGAACTGGCAGCTATGAACATAAAGATGACCCTCCAGTTAAAAGAATAG |
Protein: MDPAASKKMEGVKSDVADAPGNSSSNNREMEAAEARFMELCKSGFSLDDDTCSQAVKLFKETEKLLLTNMSAFGNGMPEEAERFWFAFVLYSVKRLREKNEDNAQQGADGSGFNLCQILRVLKLSLVDFLKELPQFVVRAGPLLSNVYGADWESRLEAKELQVNYEHLNNLSRLYKRAYLEFFLTSDAKDDGKVTFGSLTGNVSDYHRFGWLLFLALRTHTFSRAKDLVTCTNGLVSVLAILLIHVPVRFRKFSIHEFPGFVKKGDKDVDLPASLCNIYETSEDDLRKIMGMANNLITDILKKTPLTASECKTENLESIDTDGLTYFDDLMEESSLSSSLNILEKDYDDALLNKGGLDERIFISEDSLLGSAGTLSSGTVNSGGVKRKYDSITSPAKTITSPLSPHRSSASHANGIPSGANSKLAATPVSTTMTTAKWLRTIISPLPPKPSADLERFLASCDKDMTNDIMRRANIILEAIFPSSALGERCVTGRLQIANPMDNIWAEERRLEAKKLYCRVLETMCKAEAQILHATNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLDRTGITSFDLSKIIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLMVAKPSLSAEINRLGLLAEPMLSLDAIALHINFSSGRLPTVPSFQKHETYPGQNGDVRSPKRPCTDYRSVLVERNSFTSPVKDRLLAFSNLKSKLPPLQSAFASPTRPSPSGGGETCAETGINIFFSKINKLAAVRINGMVERLQLSQQIRESVYCLFQQILVRQTSLFFNRHIDQIILCCFYGVAKINQLNLTFKEIIYNYRKQPQCKPQVFRSVFVDWSSARHNSRKGQDHVDIITFYNEIFIPSVKPLVLEIGPVGSASKISCGPAINTTNDGHCPGSPKVSYFPSLPDMSPKKVSTTHNVYVSPLRTSKMDALICHSAKSYYACVGESTHAYQSPSKDLTAINNRLNGNRKIRGMLNFDDADVGLVSDSMVANSLYLQNGSCASSSGSFIPIEVGFQQLSPVKEGTVKNMNTPLLPFECRQAKISYAGKFTADVCFQYGGAGAAVIRENFNLGHFPVMLMSMLCHLKSADPKILVSCKEEPTEMGGYFILNGLERVFRLVILPKRNYPMSMVRSSFSERREGYTDKAVVIRCVREDMSAVTVKLYYLRNGSARLGFWIRNREYMLPVGIVLKALVDTSDREIYENLTCFYDEKYEKVKGAVGTPLVGERAKIILDELRDLSLFTRTQCRHHIGQHFREVMIGLEKKSFSDVADAVLKDYIFVHLNNNDDKFNLLIFMVQKLFSLIDQTSVPDNSDSLQNQEALLPGHLITIYLKEKLEEWLQKAKKLLEDEISDKSPKKAFDLCSLAHVKKVIDKNPLKQIGPAIEAMLRSGGLATQSGLDLQQRAGFTVQAERLNFLRFISFFRSVHRGTSFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSHIDSKRGNRDFFKIRASILNVLVGIGMTSSLPKLVKAGPPQILHVLLDGRVVGVIPSSEAEKVVSHLRKLKVLASSVIPDDLEVGYVPLSLGGAYPGLYLFTNPSRFVRPVKNLSIPSNESQNIELIGPFEQVFMEIRCPDGGDGGRKNAFPATHEEIHPTGMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMAFSSVALQFRADQKLYHLQTPQSPIVRTSSYTKYSMDEHPSGTNAIVAVLAYTGYDMEDAMILNKSSVDRGMCHGEIYQTETIDLCDGKSKSDRIFRRSNIDKSVLPLIDADGLPYVGQIIHPNEPYCSIYNETTSTTKTNNRKGSESVIVDYVAVDTKNKKDIQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGRFMDATPFASSVKERANERDTTSESKSLVDELGELLREKGFNYHGSEVLYSGVYGIELTCEIFIGPVYYQRLRHMVSDKYQVRSTGRVDHATRQPIKGRKHGGGIRFGEMERDAMLAHGAAYLLHDRLHTCSDYHVADLCSLCGSILTTVYNQSQKRPVRQIGGLPPGRAPKKVTCNACQTNKGMETVAMPYVFRYLAAELAAMNIKMTLQLKE |